YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52140449, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKTKALSS ILLGFTLALT GCVGTKAEEN HSKPKQEQTA KETKKGNKLT KGQKMANILS  60
   61 DTNWQGTRVL DKDKNDLTKE NANFIGLAKY DAKSGRYEFF DAKTGASRGD KGTFFITNDG 120
  121 KKRILISESM KYQAVVDMTK LNKNVFTYKR MGKDANGNDV EVFVEHVPYK KKELSFTDPD 180
  181 KELNTTTGDI VKNIDGDKIL GGTLWHGTKV LDEAGNDVTQ FNSNFISLAK FDDKFNKYEF 240
  241 FNSETGQSRG DYGYFDVLHE NKIRAHVSIG NNKYGAALEL TELNKNKFTY KRTGKDQAGN 300
  301 DITIFVEHEP YTGDMKPQFS F

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	321	0.99