YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52140364, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRVFQYII LFLTITMYAS PHAGATTIPP AEHHPNTEPT SSTKKIAYLT FDDGPNKYTT  60
   61 QILNILKEKN GKATFFVIGG KVPHYKKTMQ RLIKDGHYIG LHSMSHDVKR LYTGDPSALI 120
  121 TEMEQTQNIV QQVTKLNTHL VRVPYGSMPY LKKNYRDALV SAQYKMWDWT IDTYDWKSYD 180
  181 NPSAILERVR NQSDEQVEVI LMHDSSVTLQ ILPQVIDYLQ SQGYKLLPYN PSSHLKVNFW 240
  241 KDTRL

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	245	0.99