YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30260010, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLLLGAAI PFGTIAYTLF IFLLLLVMLR KFAWGPLMGI MKEREEHVAN EIDAAERNNA  60
   61 EAKKLVEEQR EMLKQSRVEA QELIERAKKQ AVDQKDVIVA AAKEEAESIK ASAVQEIQRE 120
  121 KEQAIAALQE QVASLSVQIA SKVIEKELKE EDQVKLIRDY IKEVGEAR

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.88
Transmembrane Helix	8	29	0.87
Cytoplasmic	30	168	0.94