YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGAP008226-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPETTLEL YDDGAESPSE LMSGEMTVTS APRNTIDPSS PDFNTLDEPI RDTIMRDVKA  60
   61 VGVKFYHVLI PREKNTLLRD WDLWGPLVLC TFMATILHGS SDEMHDGGPE FAQVFVIVWI 120
  121 GAMIVTLNSK LLGGKISFFQ SICVLGYCLT PCALALIVCR IILFSTQTAF LFFLRFVVSS 180
  181 VGFGWATYAS IIFLGDSQPP NRKALAMYPI FLFYFIISWL VVSHSNV

Type	Start	End	Confidence
Cytoplasmic	1	80	0.99
Transmembrane Helix	81	100	0.93
Non-Cytoplasmic	101	110	0.87
Transmembrane Helix	111	132	0.89
Cytoplasmic	133	142	0.78
Transmembrane Helix	143	164	0.95
Non-Cytoplasmic	165	170	0.89
Transmembrane Helix	171	194	0.91
Cytoplasmic	195	203	0.91
Transmembrane Helix	204	223	0.94
Non-Cytoplasmic	224	227	0.83