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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39754759
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPAISGEIN HWWRQMRFRL QHKKGWNEML DETFLMQTKR VNDIPLFSAT KENNAACIKK  60
   61 LLDCSSTDIF ERGELGETAL HVAVMNDNFE AAVALMNGAP ELIDEPMTSE LYHGLTALHI 120
  121 AVINQNPNLI WEMIKRGADV TTPRVTGMYF RKRREGLFYY GEPILAFAAC VGNKDIMSML 180
  181 IKAGANIRAQ DSRGNTILHL LVLQPNKTTA CQIFDFLLAQ DAEQDSALPL DMVPNYKGLT 240
  241 PFKLAAGDSN VVVFQHLVNR RKVVQWSLGP VSSYLYDLTE IDSRVDEHSV LEIIATSHKK 300
  301 EARRILELTP VRQLITLKWN LYGKHYFRSL MVIYLVYISI FTVCCINRPL KGIPENYTKA 360
  361 SNDHTIKIKK TLKESYQSYT DQLRLIGEII SLIGAIIILL IEIPGILAVG VKRFFGQTAL 420
  421 GGLFHVTLIS YALLVLLLCG LRVTGIQGEL IPMAFSLILG WFSLVYFARG FEMLGPYVIV 480
  481 IQKSIFGDIT KFMWSSIIFL IGSSAALWIF YMTQEPLALP QYRSFPITLF SQFEVSVGQI 540
  541 DLPVDHTLFT HPVVYWTHVC FSLIPNVLLF NLLVAMMSDT QWRVTQERDE LWRTQVVATT 600
  601 LMLERKWPQC LWPRLGVCGL MFGLGERWHL RVEDRNDIMA QKSIRYVDAF SKDVEAPKEE 660
  661 KPSKSDGEQS ITESNKEKSK KSKQYWSLIR RSIECEKEEC VDCPKFKFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle