YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGAP003240-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRGGPMVL GTDGTDFEHR QRVAAHYQIS ALNKSRLKYC IFFHYLLFFV MLVKLSADIL  60
   61 DRLDIFILEI EELQIPPPLW WEYFWCLSVF LSFIGLAAVR GNRVNDMKKY MVGISTIGFV 120
  121 PLLYCIFYYL NDVLEYLNLE EGTELDDTDI FVWQGYPYGL LWYGFVLMAF QVHFFSLFFA 180
  181 WNLIKAWRQR GALKKGQ

Type	Start	End	Confidence
Cytoplasmic	1	39	0.97
Transmembrane Helix	40	60	0.89
Non-Cytoplasmic	61	80	0.93
Transmembrane Helix	81	99	0.96
Cytoplasmic	100	109	0.82
Transmembrane Helix	110	130	0.95
Non-Cytoplasmic	131	159	0.97
Transmembrane Helix	160	184	0.90
Cytoplasmic	185	197	0.98