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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15004708, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNVLLTIV LIFMLVISYS GGDFKADTNE VGVSYETHVQ NVGWQNWFSD GVEAGTNGQG  60
   61 LRIEALKIKL VNAPVGAQIS YSAHVQNVGW QDWVNDGAEA GTDGKGLRVE ALKIKLVNMP 120
  121 DYTVQYQAHV QNIGWQNWVS DGAEAGTDGK GYRVEALRIK IVKKVAVQAI TLNKASDELK 180
  181 VGQTDQLSAA FNPTDATNKN LSWTSSDASI ASVDSSGKIT ALKQGTSIIT ATTEDGSKTA 240
  241 NCSVTVNPGD LQISYTTHVQ NVGWQNWFSD GVEAGTDGQG LRIEALKIKL LNAPAGAQIT 300
  301 YRAHVQNVGW QNWVSDGTEA GTDGKGLRVE ALQIKLVNMP DYTVQYQAHV QNVGWQNWVS 360
  361 DGAEAGTDGK GYRVEALKIR IVKKIAVQSI TLNKNSDELN VGQTDQLSAV FNPTDATNKN 420
  421 IKWTSSDNYV ATVDSTGKIT AVSGGNAVIT ATTEDGSKTA NCSIVVNSTD SKDNQALEKA 480
  481 KTVLNTIVQP GMTQVQKELA IHDYIVTNTQ YETAVFTSDN VSDDIYTAYG ALINHRAVCQ 540
  541 GYAEAFKMMC NLVGIPTDII EDFKLDHAWN IVKLDDGNYY QVDTTWDDPV YGDDTSLSIS 600
  601 HEYFNLSDRQ MFADHTIDKD KWHYPKAAVD NSEFYSISGD SYDSNVVYTN YNGKLSSVDS 660
  661 SGNMKTLNDD PSASINYYNG SIYYLSGSSI YKVDTNGQNK VQIASGDIRK MYLYNGAIYY 720
  721 LDANDFSINK LVLDGTYKNK KVIGITWNSS YFINNGCLYY EAYDDDYLHK VDLQSLTNTK 780
  781 ILTVSDYYVT SYSNYLFYKD SNNLYRTDLN GGNSKLIVNN ITDNFIDIFE NYIYYNDSNN 840
  841 IWYKMNLDGS NLIKLMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle