YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11268172
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSFFSVLL VIPKQSGDVM KLCGFEVGLN QPLFLIAGPC VIESLQLQLD TAGVLKEITS  60
   61 KLGLNFIFKS SFDKANRTSG SSFRGPGLEE GLKVLEAVKT QIGVPVLTDV HEYTPIDEVA 120
  121 TVVDVLQTPA FLVRQTDFIR NVCAVGKPVN IKKGQFLSPW DMKPVVEKAK STGNSQILVC 180
  181 ERGASFGYNN LVSDMRSLAV MRETGCPVVF DATHSVQLPG AQGGRSGGQR EFVPVLARAA 240
  241 VAVGISGLFA ETHPDPPNAL SDGPNAWPLH TMAMLLETLV ELDAVTKKRG FLEQD

Type	Start	End	Confidence
Signal Peptide	1	17	0.82
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	295	0.98