YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54018884, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSFNPTTKT QAALTAALQA ASAAGNPEIR PAHLLVALLD QTDGIAAPLL KAVGVDPATV  60
   61 RREAQDLVDR LPRATGATTQ PQLGREALAA ITAAQRLATE LGDEYVSTEH VLVGLADGDS 120
  121 DVTMLLKKYG ATADALREAF TTVRGSARVT TPDPEATYQA LEKYSTDLTE AARTGKLDPV 180
  181 IGRDTEIRRV VQVLSRRTKN NPVLIGEPGV GKTAIVEGLA QRIVAGDVPE SLRGKKVISL 240
  241 DLGAMVAGAK YRGEFEERLK AVLEDIKNSA GQIITFIDEL HTIVGAGATG ESAMDAGNMI 300
  301 KPMLARGELR LVGATTLEEY RQHIEKDAAL ERRFQQVLVG EPSVEDTVGI LRGIKERYEV 360
  361 HHGVRITDSA LVAAAALSDR YITSRFLPDK AIDLVDESAS RLRMEIDSRP VEIDEVERAV 420
  421 RRLEIEEVAL SKETDEASKL RLEKLRQELA DDREKLNQLM TRWQNEKSAI DQVRTLKEQL 480
  481 EALRGESERA ERDGDLGKAA ELRYGRIPSL EKQLAEAEKA SGAAADGEVM LKEEVGPDDI 540
  541 AEVVSSWTGI PVGRLLEGET QKLLRMEDEL GRRVVGQKEA VQAVSDAVRR ARAGVADPNR 600
  601 PTGSFMFVGP TGVGKTELAK ALADFLFDDE RAMVRIDMSE YSEKHAVARL VGAPPGYVGY 660
  661 DQGGQLTEAV RRRPYTVVLF DEIEKAHPDV FDILLQVLDE GRLTDGQGRT VDFRNTILIL 720
  721 TSNLGAGGDQ EFVMNAVRAA FKPEFLNRLD DVVMFHALDE EQLEHIVDIQ LEQLQKRLAQ 780
  781 RRLTLDVTGS ARFWLAVRGY DPVYGARPLR RLIQQAIGDT LAKELLAGTV TDGDTVKVGV 840
  841 SPDGDNLVVE PAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle