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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54022228, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPGGPVPGA PDAKPKSFKP SLKRLLGRLA PERFYVWCIV VLAIVSVVLN TLGPYLLGKA  60
   61 TNIVFDGVVG KNLEQMRGLS KEEAVERLRD SGNDTLADML SAMNVVPGVG VDFTAVGRVL 120
  121 LVVLALYLAA ALFSWLQAYL LNIVINRTVK RLRSDIEDKI HRLPLRYFDS QPRGDVLSRV 180
  181 TNDVDNVSQS LQQTMSQLLM SVFSVLGILI MMFWISPLLA VIALLTVPAA IVVTAQIAKR 240
  241 SKPHFVNQWK YTGLVNAQVE EAYTGHEVIT AFGRNREVGE EFDQRNDKLY ESSFKAQFIS 300
  301 GLIMPSIMFL GNVNFVLVAL VGGLRVATGQ LSLGEVQAFI QYSRQFSQPL TQIGTMVNLL 360
  361 QSGVASAERI FEILDAEEQS PDPQLPDVRP LDRGRVEFEA VSFRYEPDKP VIERLSLVAE 420
  421 PGHVVAIVGP TGAGKTTLVN LLMRFYELDA GTITIDGVDI TRMSRDALRS RIGMVLQDTW 480
  481 LFRGTIRENI AYGNPNASEE EILAAARAAY VDRFVHALPD GYDTMIDEEG SGVSAGEKQL 540
  541 ITIARAFLAK PSILILDEAT SSVDTRTELL VQQATAALRR DRTSFVIAHR LSTIRDADLI 600
  601 VVMEAGRIVE HGTHQRLLEE RGAYYRLYNA QFAAAAAEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle