YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17935461, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFSQAFAQD ASGGASGFGS GLEMLFLFAP LMVVWYFFLI RPQRAQMKKR QETLTSIRRG  60
   61 DQVVLGGGIV GKVTKVIDDN ELEVEIAEGV KIRAARAYIA EVRVKGEVVK TEAAS

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.91
Transmembrane Helix	19	40	0.94
Cytoplasmic	41	115	0.98