YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25286227
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSAALSSGR KRVVVFISGG GSNMVSLAKA CQAADFPAEI ACVISDKASA GGLEKARDLG  60
   61 IPTLVFERKT YASKAEHEGA ILAALGEIAP DIICLAGYMR LISGDFIAPY EGRIINIHPS 120
  121 LLPLFPGLHT HQRAIDSGMK ISGCTVHFVT EGMDEGPTIA QGAVPVLSGD TAETLAARIL 180
  181 TVEHQLYPLT LKRLAEGKVR MEDGKAVSTD NESKSEYSSL ISAF

Type	Start	End	Confidence
Signal Peptide	1	28	0.92
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	224	0.98