YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25290024, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKAEKKQN ALWENVKVII QALLLAMVIR TVLFQPFTIP SGSMMPTLLV GDYLFVNKFS  60
   61 YGYSKYSLPF SPNLFSGRIL EFSKPKRGDV VVFRLPPNPE VDYIKRLVGL PGDRVQVTNG 120
  121 VLFINGQPVP KQPDGTFTSD YRADPGTNVP VFRETLDNGV TYDTLDQSPD SRGDNTREFV 180
  181 VPEGHYFMMG DNRDNSLDSR FDVGFVPEEN LIGRASVIFF SLGNDTPFSR IWEWPANMRW 240
  241 DRLFKVVG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.79
Transmembrane Helix	16	34	0.78
Non-Cytoplasmic	35	248	0.84