YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17739291, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVFSILVG IFFSVAIYLM LSRHSIRMLL GIAILGNAVN LLLFTAGRLT RDVPPIIPAG  60
   61 MDTLPAGAAN PLPQALILTA IVISFSFFCF LLVLTWRAFQ ELQTDDTDEM RTAEPAGEPL 120
  121 PPLGY

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.80
Transmembrane Helix	4	22	0.80
Cytoplasmic	23	28	0.77
Transmembrane Helix	29	50	0.88
Non-Cytoplasmic	51	74	0.86
Transmembrane Helix	75	94	0.96
Cytoplasmic	95	125	0.92