YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17738895, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASILTNNNA MAALSTLRSI ASDLSTTQDR ISSGLKVGSA SDNAAYWSIA TTMRSDNKAL  60
   61 GAVSDALGMG AAKVDTASAG MDAAIKVVTD IKAKVVAAKE QGVDKTKVQE EVSQLLDQLK 120
  121 SIGTSASFNG ENWLVSSANA TKTVVSGFVR DAGGTVSVKT TDYALDANSM LYTEGTPGTI 180
  181 DANSGILNAT GATTTVGAKT YTQISVLDMN VGTDDLDNAL YSVETALTKM TSAGAKLGSL 240
  241 SARIDLQSGF ADKLSDTIEK GVGRLVDADM NEESTKLKAL QTQQQLAIQA LSIANSDSQN 300
  301 ILSLFR

Type	Start	End	Confidence
Signal Peptide	1	21	0.59
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	306	0.99