YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17738892, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSILTNTAA MSALQTLRAI SGQLEDTQSR VSSGLRVKSA SDNAAYWSIA TTMRSDNMAL  60
   61 SAVQDALGLG AAKVDVAYSA MESTVEVVKE IKSKIVAATE EGVDKTKIQE EIDQLKKQLE 120
  121 SIAQGASFSG ENWLLGTGAK TVVSGFVRDG GGTVSVTKTD YTLIDTTAGT TTANVLFGLT 180
  181 GSPATLDTTK GIIGQPGTAS GISVWDIDLK LFNSATPPTY TIGNLLTDVE TAFQSISSAS 240
  241 AALGSIKMRI GLQEDFVSKL TDSIDKGIGR LVDADMNEES TKLKALQTQQ QLGIQSLSIA 300
  301 NTSSENILSL FRQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.81
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	313	0.99