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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54294112, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILKYKNFE IQKMDNSSVF NETTLKRVPH FLVLIIILLL GLPYIGLNWG LDFSNLAITI  60
   61 NDGKIAGSQL IESQIRGYFR QTLLQWSGFS LAAVTVLLAF TQYRLSNDKI ALIIGLAILF 120
  121 SGSIEALHTL VIDGLALQGP EKNNLDALIW FFSNSVSGLI LITGLSLLVH AGANKPVRLV 180
  181 TFILLTTFWV LAAIAVIYYA AVIIQIPDMW LYDSYVSRPF ELISVFIYLM LMIIVYPKIY 240
  241 ASYPTILSDS VFYMSLTQVV LAIYIMLLST TPYDSAFNIA YFLKVVVYFI PCTCFVINYV 300
  301 FSYSAVLEGQ KNLKIKQEEL KYMASHDPLT NLFNRREFED LLDKSIANAQ RNNSSLALLL 360
  361 IDLDNFKAIN DTFGHFHGDE LLKQFANRLV LLVRKGDLLS RVGGDEFTLI SLNIESPSSA 420
  421 RHLAERILNE LNSPYTINGK LITVTVSIGI SIFPDDGNTT EDLLRKADLA MYKAKNSGKN 480
  481 TYQFYTEQLG YSQHRESELE SHLRKALQND EFELYYQPKF NLINMEIIGA EILLRWNNEA 540
  541 LGGVSPNEFI PVAENTGLIT ELSQWVLQKS CIQIMHWASQ YNKMLSFSIN ISPVQLTNPQ 600
  601 FPKILEKTLQ EYQYPAEYLE LEITENTLMG DQDEISKMLN VISDLGIKLS LDDFGKEYSS 660
  661 LNRLKTLPID SLKIDKTFIS DIHSEHEKVV IIDIIIKLAN ELGMSIVAEG IETIPQLKYL 720
  721 VSRKCHFGQG FLLSKPLTAN EFTSIAYTKL GKTKSNAKVI SLINNNRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle