YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46237565
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAGDFVFQFK GLCYYTNGTQ RIRLVIRYIY NREEYVRFDS DVGEFRALTE LGRPSAEYYN  60
   61 KQYLERTRAE LDTVCRHNYE ETEVPTSLRR LEQPNVAISL SRTEALNHHN LLVCSVTDFY 120
  121 PAQIKVRWFR NGQEETAGVV STQLIRNGDW TFQILVMLEM TPQRGEVYIC HVDHPSLESP 180
  181 VTVEWRAQSE SAQSKMLSGI GGFVLGVIFL GLGLFIRHKR QKGPRGPPPA GLLQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	195	0.91
Transmembrane Helix	196	216	0.95
Cytoplasmic	217	234	0.89