YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49531851, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRKHLSLH FILASTLSCT AMSHVFAGQI FVYKDKSGGT LLTNRKSSDP SMTKVKATYY  60
   61 PDSNIHSYNN WGASEASVLP SYSKNRNAFD QIIHQASQRH GISEGLIKAV MHTESGFNVY 120
  121 ARSPVGAQGL MQLMPATARR FNVSNAYDPQ ENIFGGAQYL SWLLKRFNGN TQLALAAYNA 180
  181 GEGNVDKYGG IPPFRETQDY VRRVTSRYQN LYASGNTVSE NLATPQVIAQ SANYAPANNH 240
  241 VPETTKYSSQ RQIISLSEGT YTDAPNTYVT RNATASARIH ISN

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	283	0.99