YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49529344, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKILITGGA GFIGSAVVRH IIQNTDNTVL NVDKLTYAGN LESLAKVADN SRYQFSQTDI  60
   61 CDRAALDQLF ETFQPDAVMH LAAESHVDRS ITGPAAFIET NILGTYQLLE AARHYWNGLA 120
  121 QDKKAEFRFH HISTDEVYGD LEGTEDLFVE TTPYAPSSPY SASKASSDHL VRAWHRTYGL 180
  181 PVVLTNCSNN YGPYHFPEKL IPLVILNALA GKPLPVYGNG AQIRDWLYVE DHARALYKVV 240
  241 TEAKVGETYN IGGHNEQQNI DVVKAICNLL EELAPNKPEG IANYQDLITY VKDRPGHDLR 300
  301 YAIDASKIKK DLGWVPQETF ESGLRKTVEW YLANQEWVKH VQSGEYQNWV QNQYQA

Type	Start	End	Confidence
Signal Peptide	1	16	0.50
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	356	0.99