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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55250696, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCARWLLLLA LASVACCQTV EDRAREFLNK FDEEASDIMY QYTLASWAYN TDISQENADK  60
   61 EAEAYAIWSE YYNKMSEESN AYPIDQISDP IIKMQLQKLQ DKGSGALSPD KASELRNIMS 120
  121 EMSTIYNTAT VCKIDDPTDC QTLEPGLESI MAESRDYDER LHVWEGWRVA TGMKMRPLYE 180
  181 KYVDLKNEAA KLNNYEDHGD YWRGDYETID DPKYSYSRDQ VIEDARRIYK EILPLYKELH 240
  241 AYVRAKLQDV YPGHIGSDAC LPAHLLGDMW GRFWTNLYPL MIPYPDRPDI DVSSAMVEQG 300
  301 WDEIRLFKEA EKFFMSVNMP AMFDNFWNNS MFIKPEERDV VCHPTAWDMG NRKDFRIKMC 360
  361 TKVNMDDFLT VHHEMGHNQY QMAYRNHPYL LRDGANEGFH EAVGEIMSLS AATPSHLQSL 420
  421 GLLPSDFKQD YETDINFLLK QALTIVGTLP FTYMLEEWRW QVFKAKIPKD EWMQQWWQMK 480
  481 RELVGVAEAV PRDETYCDPP ALFHVSGDYS FIRYFTRTIY QFQFQEALCK AAGHTGPLYK 540
  541 CDITNSTKAG DKLRHMLELG RSMSWTRALE EVAGTTKMDS QPLLHYFSTL MEWLKEENQK 600
  601 NNRVPGWNVN VNPGVLTSSF INDAEISENA FKVRISLKSA LGNEAYTWNA NDIYLFKSTM 660
  661 AFAMRQYYLK EKNTDVNFTP ENIHTYNETA RISFKFAVMD PTKTGTVIPK AEVENAIWQE 720
  721 RDRINGAFLL SDETLEFVGL MATLAPPKEE KITIWLVVFG VVMGVTVLAG IYLVTTGILN 780
  781 RKKES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle