YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRL_CEREL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKVSSQKG SRLLLLLVVS NLLLCQGVVS TPVCPNGAGN CQVSLRDLFD RAVMVSHYIH  60
   61 NLSSEMFNEF DKRYAQGKGF ITMALNSCHT SSLPTPEDKE QAQQTHHEVL MSLILGLLRS 120
  121 WNDPLYHLVT EVRGMKGAPD GILSRAIEIE EENKRLLEGM EMIFGQVLPG AKETEPYPVW 180
  181 SGLPSLQTKD EDARYSAFYN LLHCLRRDSS KIDTYLKLLN CRIIYNNNC

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	229	0.99