YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37542404, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELKRQVSL TQAVTLALVL LTSASSAEEY DYYSWQSDNF HSGRFYAKQP QCVDIPADLR  60
   61 LCYNVGYKKM RLPNLLDHET MPEVKQQAGS WVPLLAKRCH ADTQVFLCSL FAPVCLDRPI 120
  121 YPCRSLCEAV RDSCAPVMET YGFPWPEMLQ CEKFPIDNDL CIPMQFSAGH ATQTPVSKVC 180
  181 PPCDNELKAD TIMEHYCASD FALKMKIKEA KKEKGDRKLI AAQKKKKVLK MGILRKKDLK 240
  241 KLTLYIKNGA NCPCSQLDNL GSNFLIMGRK VDQQLLLMSI HKWDKKSKEL KFAIKYIKSQ 300
  301 QCPTYHSVFQ

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	310	0.99