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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55249967
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENAHTKETP ECLAYFGVSE STGLTPEQVK KNQAKYGFNE LPAEEGKSIW ELVVEQFEDL  60
   61 LVRILLLAAC ISFVLAWFEE GEETVTAFVE PFVILLILIA NAVVGVWQER NAESAIEALK 120
  121 EYEPEMGKVY RSDRKSVQRI KAREIVPGDI VEVSVGDKVP ADIRITAIRS TTLRVDQSIL 180
  181 TGESVSVIKH TESVPDPRAV NQDKKNMLFS GTNIAAGKAI GVVVATGVST EIGKIRDQMA 240
  241 ATEQEKTPLQ QKLDEFGEQL SKVISLICVA VWLINIGHFN DPVHGGSWIR GAVYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MCVTKMFVIE KVEGESVTLD QYDISGSKYT PEGEVTKNGL PVKCGQFDGL VELATICALC 420
  421 NDSSLDYNES KGIYEKVGEA TETALCCLVE KMNVFNTDVR GLSKVERANT CCAVIKQLMK 480
  481 KDFTLEFSRD RKSMSVYCSP AKASKAPVGN KMFVKGAPEG VIDRCAYVRV GTTRVPLTGP 540
  541 VKDKIMAVIK EWGTGRDTLR CLALATRDNP LRPEEMNLED STKFAEYETD LTFVGCVGML 600
  601 DPPRKEVVGS IELCRAAGIR VIMITGDNKG TAVAICRRIG IFSDDEDVTG RAFTGREFDD 660
  661 LPLPQQREAV RKACCYARVE PSHKSKIVEF LQGFDEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKSA SEMVLADDNF SSIVAAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAA 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMGKA PRSPKEPLIS GWLFFRYLAI 840
  841 GGYVGAATVA AAGWWFLYCD EGPMVSFYQL SHFMQCTADN EDFAGIECEV FEAAPPMTMA 900
  901 LSVLVTIEMC NALNSLSENQ SLLRMPPWSN LWLAGAMTLS MSLHFMIIYV DPLPMIFKLT 960
  961 HLNFDQWIVV LKLSFPVILI DEALKFVARN YLEEKDQNLV SKKWD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle