YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148277593, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDKEAKHG GHKNGRRGGI SGGSFFTWFM VIALLGVWTS VAVVWFDLVD YEEVLGKLGV  60
   61 YDADGDGDFD VDDAKVLLEG PGGLAKRKTK AKVKEPTKEE LKKEREKAVP SKTEEGRRGK 120
  121 KEREDGRKEK KKSDSDISQK ASPGGKRDRA KEKASSDKSG KSKETVKKAA ETKSVPSKVA 180
  181 STDKDRKGRG SSSHAPVTKE NSQKRKN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.82
Transmembrane Helix	21	46	0.81
Non-Cytoplasmic	47	207	0.87