YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYAC3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGWFYMSC MVLGSLGSMC ILFTTYWMQY WRGGFAWDGT VLMFNWHPVL MVSGMVVLYG  60
   61 AASLVYRLPA SWVGPKLPWK VLHAALHLLA FTVTVVGLTA VFGFHNHSKI THLYSLHSWL 120
  121 GITTVALFAC QWFLGFAVFL LPWASQWLRS LLKPVHVFFG ACILSLSIAS VISGINEKLF 180
  181 FVLKNATRPY SSLPGEAVFA NSTGILVVSF GLLVLYILLA SSWRRPDPGA LTDRQVWLLV 240
  241 SHYRWDKAKK ACFAPC

Type	Start	End	Confidence
Cytoplasmic	1	6	0.86
Transmembrane Helix	7	28	0.93
Non-Cytoplasmic	29	45	0.90
Transmembrane Helix	46	68	0.89
Cytoplasmic	69	83	0.84
Transmembrane Helix	84	104	0.93
Non-Cytoplasmic	105	119	0.84
Transmembrane Helix	120	143	0.89
Cytoplasmic	144	154	0.83
Transmembrane Helix	155	175	0.94
Non-Cytoplasmic	176	196	0.94
Transmembrane Helix	197	219	0.91
Cytoplasmic	220	256	0.96