YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33585525
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLALAAPGVG GGVGAGGAML GVVELLLLGT AWLAGPARGQ NETEPIVLEG KCLVVCDSNP  60
   61 TSDPTGTALG ISVRSGSAKV AFSAIRSTNH EPSEMSNRTM IIYFDQVLVN IGNNFDSERS 120
  121 TFIAPRKGIY SFNFHVVKVY NRQTIQVSLM LNGWPVISAF AGDQDVTREA ASNGVLIQME 180
  181 KGDRAYLKLE RGNLMGGWKY STFSGFLVFP L

Type	Start	End	Confidence
Cytoplasmic	1	8	0.52
Transmembrane Helix	9	34	0.80
Non-Cytoplasmic	35	211	0.60