YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46914431, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYESVKHLHF VAIALSVSLF IVRYCLMMAN SPLLGKKFLK ITPHAVDTVL LLTGVGLIFI  60
   61 TGFMPFTAGG GWLTEKITCV FAYIALGVFT LHVGKNKVFK TFAFFGALGW IVLAAKLAVM 120
  121 KTPLLG

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.89
Transmembrane Helix	7	27	0.93
Cytoplasmic	28	44	0.84
Transmembrane Helix	45	66	0.89
Non-Cytoplasmic	67	71	0.73
Transmembrane Helix	72	93	0.85
Cytoplasmic	94	100	0.73
Transmembrane Helix	101	120	0.93
Non-Cytoplasmic	121	126	0.77