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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46913693, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRNMRSIR YIYPLYFTVF MLFIGLVTTL GINYWVSPKL VTNEETIIKN TLQDLNSDIF  60
   61 TELEQVQAQQ RTITQTIALV SSEQIDQILP GLVDQYGKTQ VFGGGIWPLP EQRQQGIDKY 120
  121 STFYHRDASN KLIENTYWNS ADSLNYYDQG WYKNGLASPQ GQCAWAPAYK DSASAEARTN 180
  181 CAMSILKEGK QYGIATIDLT LGFFNDLVEQ KEQALNGDIL IIESDGKILN NTRSINRSLI 240
  241 LDNLSSIAQE SPFAANISRN LSLVTDNKPL QVRYDNNGVN YTLFMHRISG TPWTVAFSTQ 300
  301 TTLLESTTHS ILVTLASIQL PIAAAIIFFC FIAFSQLARR LEALRNNIED LSSGDADLTA 360
  361 KIKINKNDEV GGIAISVNHF IIYLREMMGS VSNSSNQISN IIDEVKNQSQ INHDIVDRHA 420
  421 NETMQVITAI NEMASTAEEV ARNTTNTVSN THNATVAADQ SKAAVNKATD SVALLMTQIE 480
  481 TASENVTEMS NETQKISTVL NVIRDIAEQT NLLALNAAIE AARAGDQGRG FAVVADEVRA 540
  541 LAARTQNSTA EINEMLTHLQ AGVTTVVTAM DNTKTRCKVV VDDTKQVNGG LDEMLTSIGE 600
  601 INDLNSHIAT AAEEQSSVTE EINHNMSQIQ NMIQMLTESA QQTTTSSHSL SEANNQLNTL 660
  661 VSRFKLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle