YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46913351, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIQVKDID IYILNAPQLH ALWVEDKKRK GVSNEEISSK LEMLGLSFTG VVSSRGSLGH  60
   61 ELKALTALAL DMKKGGSIIG AYEIKKQGSK SYIIFKGDHK LRNIVKGTRY LASNTKLIAL 120
  121 GIGKAGLKAS SKAGVLITVI YSVPYRTLEW FVKKDYLIND WAVNVSSDII KASISACFGY 180
  181 MVASSLVVTS GIVVLPIAAG IVAALFVGES LSYIEDRLKL KGKLIKVLNS YVEESALDEV 240
  241 DRIVNGHSAM KSHQHIRNSA IRVY

Type	Start	End	Confidence
Cytoplasmic	1	176	0.76
Transmembrane Helix	177	208	0.72
Non-Cytoplasmic	209	264	0.56