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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54308425, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFNRNGIGG KLLLAFSAMA ALMILAVVIG VAGFSLVAKT ERTVINSAVP ALVEARHLSD  60
   61 LSSRIIFTAQ VLATSKTEHE RQRQGRALTI YIEGLKDSLT ALKSYPFDED LMSQLDGDVK 120
  121 SIIDNLALMG LLVGRQIRLQ AQSDELTSEM LVATQQVDSL SQSQVSNAST IAVANVSRIY 180
  181 DLVESGDNQA VYNALDSLVE VDMDLSERLF ELRFLALQVI NMLDDSKRLG DIGNLTRLKE 240
  241 RFIHAVNVMS YRVKSVEDPS RSAQLTELTS NLNRGGVLFG VLEQLLYATK DVERLDQQNL 300
  301 VLFQQLNSTV DGIITAANEG TQQAVTKVDE TLTVARTTLI SISVIGLAAL VLIMWRFVYA 360
  361 SVICRFNDYS QALLSLACGD LDIQLDIKGD DELAHMGRAI MVARDTASER FRLTLVERKI 420
  421 RQELQLHKES LERLVAQRTS ELEKTNSRLN EEVINHEKAR AEAEKANRAK SAFLATMSHE 480
  481 IRTPMNGILG TASLLGDTGL NQQQARYLNV INRSGETLLD ILNDILDYSK IEAGHLDIRP 540
  541 VDFSLSELVL DVHNMLESRA LAKHIQLVNH IDDSMNNVWL GDVTRIRQVL INLVGNAIKF 600
  601 TDQGQVTIAV SMNPDMPDEL LFEVTDSGIG IDEAEQDILF NAFKQAEEGR KTIGGTGLGL 660
  661 AISRHIVAAM EGEIGVDSTI NVGSCFWFSI PLERGKLSTG TEGTMITIPP AHILLVEDNP 720
  721 VNSMVAEGFL RRLGHSVITA EDGKSAEREF HQHAFDMALL DINLPDTDGV TLLHRLRRIE 780
  781 EANSESWEEP VPMVAFSAHV FREEVEQYLT AGFAGFLPKP VTEKQLIATI GSILKGDKRV 840
  841 VVENIPFDNV SVIENDKQDN NNAEKSESDS VFPVLKESVL GDDLQVLGVE QVQKLIALFA 900
  901 SSSSETLDKL QQAVEASDMA EVSNHAHTLK GAAGTMGLIR LHQECLLFEK AGKAGSLDGV 960
  961 DIKTVSQAFE ASKQALESTF IPH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle