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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46912680, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYNILTVGN PNSGKTTLFN GLTGAKQQVG NWAGVTVEKK TGNYQCAGDN FALTDLPGIY  60
   61 NLDSANDANS LDEAIASRAI LTTPADVIIN VVDASCLERS LYMTLQLREL GRPMVVVLNK 120
  121 MDVLQRQRQI LDVKALEKML GCPVLCLSAN NLKQVEAFKT NLHKMLAQGV AVGDMVLDYG 180
  181 QHFESAITEL EGLFSNGQLN ARSQAIRVLE NDTLVINGLS EADKSQACNA RNKLLVNVDP 240
  241 DIQVADVRYT YLHQLCQKVR RQEGKLSRSI SDKIDAVLLH RAFGIPFFFV VMYLMFMFSI 300
  301 NIGSAFIDFF DISVGAILVD GGHYLLDDHL PVWLVTVIAD GVGGGVQTVA TFIPVIACLY 360
  361 LFLAVLESSG YMARAAFVLD KVMQKVGLPG KAFVPLVLGF GCNVPSIMAT RTLEQERERK 420
  421 LAAAMAPFMS CGARLPVYAL FAAAFFPNNG QNVVFGLYVL GIFAAVMTGV VLRYTLYPGK 480
  481 SDSFIMEMPD YEFPTMRNVG IKTWQKLKRF VFGAGKTIVV VVACLSFFNS LGTDGTFGNE 540
  541 DSENSVLSRA AQIVTPVLSP IGVKEDNWPA TVGIITGIFA KEAVVGTLNS LYAPSADEDA 600
  601 EYDLFGSLQE AVASIPANLA DLSYSDPLGI TVGELDDLST AAEEQEVDQS IFGNIQAHFV 660
  661 SSAAAMSYLI FILLYTPCAA AMGAYVREFG QKFSVFIAGW TMLLAYTFAT IFYQVAHFTD 720
  721 HPVSSMGWIA FFVLINVGLF IVFKYQGQKQ QKELALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle