YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54308024, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFLTRAVM LLAMTMTLVG CGDQRELIHL NGSTMGTYYS IKLIKQEGLP AATDIQAEID  60
   61 RRLELVNDQM STYRKHSELS QFNQHTTNEP FTVSADTAKV VKESLRLSEL TNGAYDVTVG 120
  121 PIVNLWSFGP EARPEATPTD EELNKRREII GYHHLKVDGN KLIKDIPDLY VDLSSIAKGF 180
  181 GVDVVADYFD ELGVPDYLVE IGGELSVKGN NLEGIPWRIA VEKPTEDGSR SVQEIIEPGD 240
  241 MAVATSGDYR NYFEEDGIRY SHLINPKTGK PIANHVVSVT VLHPSSMTAD AYATAFSVMG 300
  301 EEESIKLANE ENLPILLVIK TENGFKEYLS DDFVPYLKKK

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	340	0.99