YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54308009, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLVALSV LAATALPAVV SAADYSDDIH KNDYNWMQFN LMYAVNELPG ESDHDYLEME  60
   61 FGGRSGIFDL YGYVDVFNLT NSKSSDKNGE PKIFMKFAPR ISLDAVTGKD LSFGPVQELY 120
  121 IATVFEYGGD AGYTGVLTNG DGTAQLDSDG KPQYGAAKGP NNAKVGLGSD VMVPWFGKVG 180
  181 LNLYGFYDMN EKDWNGYQIS TNWFKPFHFF DNGSFISYQG YIDYQFGMNN DVPGLTSSNG 240
  241 GAMFNGLYWH SDQFAVGYGL KGYKEIYGLK DGGFAGKTTG IAHYFDVTYK F

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	291	0.99