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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54307731, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNTKRFKRL QHTLMLAFLV LSITPLTLSA FFFLNSHTKD LAEQSTNHLA SLLDNKQKQL  60
   61 NNFFTARELD AQSFARSELS NASGGRFYGL VGAFNQLGEI DTLLKGTTNS RYFKETLTTK 120
  121 NKNFSSDNSA SFVGHERYRL MYKRYNRAYE EYLKRSAFSD IMLVDINGNV VYSVFQHNKF 180
  181 GSNLLDDNNP TLALKETFTK IQAKTKKHQL EPDVVPVVFT DFSLDPFSKE YTAWFAAPII 240
  241 QQGYLHSYVF FKLKNKTISD LIKNANLSTN FVQTLLIGPD HKSRITDGKN APATLTSQKI 300
  301 DAALAGESGV GSFNNYNNVS VLSAFSQINV MGTTWALLVE LPEKEAFARI HQLEKLFFFA 360
  361 MLTAIVLVFI SSHWLSNSIT APLLRLTWAA ERASAGDLEQ EIKGTERSDE IGRLAISFAR 420
  421 MQRSIREKIT LIRDQNNELE QNLKVISQQN ENLQAADKLK DEFLATTSHE LRTPLHGMVG 480
  481 IAESLLAGAN GPVQKSQRRQ LEMIINSGQR LTNLVDDLLD YHKMRYGDLD INKHAVNLPS 540
  541 AVRLVLELSS HLLGSKPVRI INQIPNDLPL VLADEQRLEQ ILYNLVGNAI KYTSEGKIIL 600
  601 SSTVLENQIR IQVVDTGQGI PAEQLEHIFE PLIQANTGLA NYRQGAGLGL SISRQLIDLM 660
  661 GGHLYVSSQP MVGTTFSFTL NLASNEDIVA SQQSTNGQIH FQAPSSETTT CETENLPENP 720
  721 DGELLLVVDD EPVNLQVLNN FLRLEGYRVL TADSGPQALK IIEQQQPALI LLDIMMPEMS 780
  781 GYEVCHILRE EYSLIELPII MLSALGQVQD RIKGFESGAN DYLTKPFNKE ELIARISAHL 840
  841 QAGKTEVQRQ KNAALQQEIH RREQVEVGLL TTQSRLLGLL ESTNEAILCV QNEGRIRYAN 900
  901 SAAGKLFKRS PEQLERYNIE DILVTHLPND ISQSHHFNGN LTFRIGGELK PLETDVINLP 960
  961 EESGLKRMFV FDNEGPSAQH RISMLEDAID VLSRFAFDGD KHNLQQLREL GGEFTRLADK1020
 1021 LGDNGKNKAD MVRELLVEVM KATLKYWETA SQKTKFELAE ESGLWRVYLD RSTLQTRTLD1080
 1081 KYLHVETLPK TPRWRTVINT IDFVLERCTD SSLERHEVQT MRDKLQHIIS Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle