YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54307516, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKHPIIAV TGSSGAGTTT TSEAFRKMFN MMNINASWLE GDSFHRYTRP EMDVEIRKAK  60
   61 EQGRHISYFG PEANDFPQLE KFFRQYGDDG SGQFRRYLHT FDEAVPYNQM PGSFTPWQKL 120
  121 PENTDVLFYE GLHGGVVDGE VNAAEHVDLL IGMVPIVNLE WIQKIVRDTR DRGHSREAVM 180
  181 ESIVRSMDDY LNYITPQFSR THINFQRVPT VDTSNPFSAK GIPSLDESFV VIRFRGIENV 240
  241 DFPYLLSMIQ GSFMSRHNTL VVPGGKMSFA MELIVRPLIQ QLIDTGKVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	289	0.99