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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46911915, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFIKRLLIL AIICITLGVS TIFGFYLYVK PELPDVTTLR NVELQTPMQV FSADGELISQ  60
   61 FGEKRRIPLA LKDIPPQMIN AFIATEDSRF YQHPGIDPIG ITRAAFVVLT SGSAKQGAST 120
  121 ITQQLARNFF LTNEKKIMRK VKEIFIAIHI EQLLTKDEIL ELYLNKIYLG YRSYGVGAAA 180
  181 QVYFGKDISQ LTLSEIAVIS GLPKAPSTMN PIYSLDRSTT RRNVVLGRMF AEGYITQTEL 240
  241 NQARSEPIIA RYHGAEIELS APYFAERARS WLVERYGENA YTSGMRVYTT VDSKLQKSAQ 300
  301 HAAISNLLNY DQRHGYRGAI TTLWQPDQTA MAENDIVEHL KKQPSYGDLT PAVVTNVDKK 360
  361 IANVVIKGGE NVTLEWDGMK WARKFVTDTR QGAAPKKASD ILASGQQVWV QPKTKQAEDG 420
  421 TESTYWVLSQ VPDANTAFVA ASPQNGAVLA MVGGFNFAHS KFNRATQSVR QVGSSIKPFI 480
  481 YSAAIDNGMT LATLVNDAPI NRWDQSQGTA WRPKNSPPTY NGPTRLRLGL AQSKNVMAVR 540
  541 VLRSVGLDQT IGFLTRFGFK RDEIPRAEAI ALGAGSLTPV EMAQGFSVFA NGGYFVKPYF 600
  601 IERVEDAYGN LIYQANPNIV CNDECQDEKQ SAGESVATNH AVINDIAISE QELGTAGRAQ 660
  661 ESDQQPVKYA PQVISESNAF LVREMMASNI WGGGNWRTGT GWNGTGWRAQ VLKRRDIGGK 720
  721 TGTTNGSKDA WYSGFGPNIV ATAWVGFDKH SRELGKASWN NNLGKEQISG GEAGAKTAQP 780
  781 AWIEFMKAAL QDVPVQTKQL PEDIVTVRID SESGKLSNRN DASSMFEYFE KGTEPTETVS 840
  841 ESGSESIFEA DSSDELF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle