YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54307432, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRTLYNLL LVLASPFLLF GLYKKKEGKP SFGSRWKEHF GFTPPLTAKA DQSPIWIHAV  60
   61 SVGESIAAIP VIKALKLQYP NTPIVITTTT STGAEQVSKL GGLVEHRYMP LDFAWCVRGF 120
  121 LKNIQPSALL IMETELWPNT LATVHKNKIP IMVMNARLSA RSAARYQQFQ SVFNLLAKHL 180
  181 DHVLCLHSDD AERFKQLGLP AKRISVTGSI KYDIEIADTI VQQANTLRET IGMQRPVWVA 240
  241 ASTHKGEDEH VLAAFQSVLN TKPDSLLILV PRHPERFNDV EQLCIQAGFE CVRRTQTQPI 300
  301 IASTQVYLAD TMGEMLVMLG AADITFMGGS LIGNAVGGHN LLEPAALSKP AITGPSYYNF 360
  361 TDITEQLRQA EAVWVCEDSQ MLAQQLIQLF DHPEQKAAMG KAALTVVKQN QGAVNKTVSA 420
  421 IVDQLSGSS

Type	Start	End	Confidence
Signal Peptide	1	21	0.85
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	429	0.97