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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54302436, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLLRQGQE QTLIGTTRAV ATALNERPNL FNLQASFLKS VEKGKDLYAY DLQNPIKLDG  60
   61 KLSDWHDYDS QMVNYGRDYV QFSRRPYSAS NSINFKHMVG KYQGYLYAVF EVNDKSPIMR 120
  121 RKNSARVDRS DHLIIAMTSP NGEFQRYVIS PYESGWVNAF RITKPADNNQ DSATSYNTSM 180
  181 IDPASLVAAS DIQGFWQNTE SGYNLELRIP LTMIGNKLGF AFYDINNSRN RIIDTIIGTS 240
  241 NTSHLNRLGT VLVPSPEIDK ILKGMGHNSS RISVIDRHQR ILAQTGDIQD SDGVWSSSVK 300
  301 YSEDDDSWWS VFEQNVLHPL YYKFLISAPQ QFTDSQQDAA NLKGVHISQA LQGRGYSQWR 360
  361 LSEDKKAMIL AAAYPIWLDN NVMGAVVAEE STNGIQTLRN RALEKLFNII LAIMAIGAIT 420
  421 LFLFASNISS RIRQLRDEAE QAIDSQGRIQ KAISPAKGSD EIADLSRSLA SMVGRLGQYN 480
  481 HYLENLSSRL SHELRTPVAV VRSSIENLSM HNQDEDSQRY IARAQDGIHR LSTILSSMTE 540
  541 ATRIEQSLQG AEKEIFPLNE LVTGCMHGYQ MAFPDQKFKV QVPETNVMID GAPDYLAQLL 600
  601 DKLIANAEDF SHNESEIEVS LSSETIQAQT YASIIVSNHG PLLPDNMTDQ LLNSMISIRT 660
  661 QDKQNKPHLG LGLFIARLIS EYHNGTIMLR NRTDNKGVEV IVTLPLDTSD K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle