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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46915431, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKLKALLA PKLSRRNFVK TGSVLGSLAA VASSVTLPFK SNSASAATST APTEDKVVWS  60
   61 SCTVNCGSRC PLRMHVSDGE ITWVETDNTG NDEYGHHQVR ACLRGRSMRR RVYNPDRLKY 120
  121 PMKRVGKRGE GKFKRISWDE AFNEIAASIT TIRKDYGNEA IYLNYGTGTL GGTVTKSWPP 180
  181 GGSLIARLMN LNGGYLNHYG DYSTAQIAVG LNYTYGGFAA NNSPSDLENT KLIVQFGNNP 240
  241 AETRMSGGGV IHHFMEGKAK SNARMIVIDP RYTDTAGGRE DQWIPIRPGT DTAFIAAMAH 300
  301 VMIKEDLVDQ AFLDKYCVGY DAKTLPASAP ANSDYKSYIL GLGNDEVEKT PKWASSITGI 360
  361 PADIIIKAAR EIGSTKPCAI IQGWGLQRTA NGEIASRAIA MLALLTGNVG LNGGGTGARE 420
  421 SSSSIPFVRF PTLQNPIEAS IPMFLWTDAI FRGPEMTATA DGIRGKEKLD VPIKFIWNYA 480
  481 GNCLINQHAD INRTHDILQD EKACEMIVVI DNHMTSSAKY ADIVLPDLTT SEQSDFCMDA 540
  541 SAGNMPYFIF ASQAIKPQFE AKSIYDICTG LAQKLGVEET FTEGRDQEGW LRHLYQLTRE 600
  601 QDPSLPTFEA MREQGIYKRF VKEHFVAYKD FRENPEANPL KTPSGKIEIY SERLASIGQT 660
  661 WELDADETIH PLPVYTPNFE GWEASKQGNY PLQLTGFHYK SRTHSTYGNV DILKDAAKQE 720
  721 MWLNPLDAQT RGIKNGDLIR IFNDRGEVHI NAKVTPRMMP GVVALGEGAW YAPDGQRIDH 780
  781 SGCINVLTTQ RPSPLAKGNP QHTNLVDVQL VKKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle