YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29351589
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAVSVFQPPV GGFSFDNCRR NAVLEADFAK KGFKLPKARK TGTTIAGVVY KDGIVLGADT  60
   61 RATEGMVVAD KNCSKIHFIS PNIYCCGAGT AADTDMTTQL ISSNLELHSL TTGRLPRVVT 120
  121 ANRMLKQMLF RYQGYIGAAL VLGGVDVTGP HLYSIYPHGS TDKLPYVTMG SGSLAAMAVF 180
  181 EDKFRPDMEE EEAKKLVSEA IAAGIFNDLG SGSNIDLCVI SKSKLDFLRP FSVPNKKGTR 240
  241 LGRYRCEKGT TAVLTEKVTP LEIEVLEETV QTMDTS

Type	Start	End	Confidence
Cytoplasmic	1	131	0.52
Transmembrane Helix	132	149	0.51
Non-Cytoplasmic	150	276	0.69