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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60680869, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSELKTGE KGVIVKVLGH GGFRKRIVEM GFIKGKTVEV LLNAPLKDPI KYKIMGYEIS  60
   61 LRRQEADMIE IISEQEAKSQ TQEAAYHQGL TEDIDVKEED LKRVALGKRR TINVALVGNP 120
  121 NCGKTSLFNL ASGAHEHVGN YSGVTVDAKE GYFDFQGYHF KIVDLPGTYS LSAYTPEEIY 180
  181 VRRHIIDETP DVIINVVDSS NLERNLYLTT QLIDMNVRMV VALNMYDELE ASGNTLDYLL 240
  241 LGKLFGVPMV PTVCKRNIGV DRLFHVVINL YEGADFIDKK GHIHPEVAKE IMDWHQSLPN 300
  301 FKDHGEHPAD YTHGKEPVGK VFRHIHINHG PDLEKAIDAV KEEISKNEFI RHKYSTRYLA 360
  361 IKLLENDPEI ERFIHTLPNA VEVEKKRDKA ARRIQETMNE DSESALTDAK YGFISGALKE 420
  421 TFTDNHLEQE QTTKVLDSIV THRIWGYPIF FLFMYLMFEG TFVIGEYPMM GIEWLVEALG 480
  481 NLIRDNMSEG PLKDLMIDGI IGGVGGVIVF LPNILILYFC ISLMEDSGYM ARAAFIMDKI 540
  541 MHKMGLHGKS FIPLIMGFGC NVPAIMASRT IENRKSRLIT MLVNPLMSCS ARLPIYLLLV 600
  601 GAFFPKNGSL VLLAIYAIGI ALAVIMARLF SRFLVKGDDT PFVMELPPYR MPTMKSIFRH 660
  661 TWEKGAQYLK KMGGIIMIAS IIIWFLGYYP DHDAYPTQAE QQENSYIGQI GQAVEPVLKP 720
  721 LGFDWKLSIG LLSGVGAKEL VVSTLGVLYT NDADADVVSL AERIPITPLA AFSYMLFVLI 780
  781 YFPCIATLVA IKQESGSWKW AIFTAGYTTA LAWLVSFAVY QIGGMFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle