YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34783266
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAYQRALAAH PWKVQVLTAG SLMGLGDIIS QQLVERRGLQ EHQRGRTLTM VSLGCGFVGP  60
   61 VVGGWYKVLD RFIPGTTKVD ALKKMLLDQG GFAPCFLGCF LPLVGALNGL SAQDNWAKLQ 120
  121 RDYPDALITN YYLWPAVQLA NFYLVPLHYR LAVVQCVAVI WNSYLSWKAH RL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.81
Transmembrane Helix	12	30	0.73
Non-Cytoplasmic	31	46	0.71
Transmembrane Helix	47	69	0.88
Cytoplasmic	70	89	0.73
Transmembrane Helix	90	107	0.93
Non-Cytoplasmic	108	145	0.78
Transmembrane Helix	146	165	0.82
Cytoplasmic	166	172	0.83