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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH3_SYMTH
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLFRSLAF YMLILVISVA IAVQLGGTSQ QTTQLVYSDL VRYIQQGEVR SITLSGAYAE  60
   61 GELVSGEKFT VQLPPSSSQA PLVEMLQQHP NIKLDFRQDN TSGIWAMLLQ TLVPVVLVLL 120
  121 AFFFIMQQTQ GSGNRVMQFG KSRARLVTDD RKRVTFDDVA GIDEVKEELA EIVDFLKHPK 180
  181 RYLELGARIP KGVLLYGPPG TGKTLLAKAV AGEAGVPFFS ISGSDFVEMF VGVGASRVRD 240
  241 LFEQAKKNSP CIVFIDEIDA VGRQRGAGYG GGHDEREQTL NQLLVEMDGF SANEGIIIIA 300
  301 ATNRPDVLDP ALLRPGRFDR QIVIDRPDLK GRLAIFQVHA KGKPLEPDVD LEVLAKRTPG 360
  361 FTGADIANLM NEAALLAARR RKKKISMQDV EDAIDRVLAG GPEKKSRVIS EKEKRVTAYH 420
  421 EAGHAVVGHM LPHMDPLHKI TIIPRGRAMG YTLFLPVEDR YNISKSEILD RMTMALGGRA 480
  481 AEEITFGEIT SGAQDDIERT TQWARRMVTE WGMSEKLGPL TYGMKQDEVF LARDMTRLRN 540
  541 YSEEVAGLID EEVRKFVHMA YQRAIDILTE HRDALEKVSE VLLEKETLEG KELQDLLEQL 600
  601 LPPRPKPEPL KPRMVGGGTS QVAPAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle