YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51856560, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCPECRTSL QPDARYCHLC GWDSKAAAAA RRAAELGRRP AWKRWVSGVS LGIMAFVVLF  60
   61 MLLVPRTDAY AVPQVGSPAP DFEIPALDGG SVRLSDLRGQ PVIINFWATW CPPCRKEMPD 120
  121 FQEVYDRYKG DGLQFYAINV GESRVTVRDF MARIGVDLPV LIDAGEEAQS AYNILPIPAT 180
  181 FFIDREGIVR AVYQYQMSRA QIEFEVQRLM AR

Type	Start	End	Confidence
Cytoplasmic	1	40	0.98
Transmembrane Helix	41	64	0.88
Non-Cytoplasmic	65	212	0.96