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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52005651, gi|...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIFSHKLS FFVLAVVFVW AKTYASYFLE FNLGVKGSTQ HMLLFINPLS FTIAALGLAL  60
   61 FAKGRRSAIW IIIIDAVMTF ALYANVLFYR FFDDFLTFAN LKQAGNLGNM SDGVFDIMAF 120
  121 HDIVYFADLI ILIALCVKLP ELKASQLKKR WAAAVVLGGV ALFFINLAVA ETDRPELLTR 180
  181 TFDRNYIVKY LGPYNYMIYD GVQAAQNASQ KAYASSDDLT SVINYTNSHY AKPNDEYFGA 240
  241 AKGKNIIKIH LESFQTFLID YKLNGKEVTP FLNKLAHGQD DMMYFDNFFH QTGQGKTADA 300
  301 ELMMDNSLYG LPEGSAFVTK GQNTYQSLPA ILNQKEGYTS AVLHGDYKSF WNRDQVYKQI 360
  361 GYDKFFDAST YDMSEDNLVN LGLKDKPFFE ESIPKLKSLK QPFYAHLISL TNHYPFILDE 420
  421 EDATLEKGTT GDKTVDGYFQ TARYLDEALE DFFKELKKAG LFDDSVIVIY GDHNGISENH 480
  481 NRAMKEVLGK EITPYQNAMN QRVPLMIRIP GKKGGVNHTY GGEMDVMPTL LHLQGIDSKK 540
  541 YINFGTDLFS KDHDQTVAFR NGNYVTPKYT MIDTTVYDTK TGKEIKGNQE TENLKSQVSE 600
  601 QLDLSDQVLY KDLLRFHEIS DFKPVDPSKY HYGKEKTGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle