YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52082327, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILVCGGAG YIGSHAVAEL LSRNEDVVII DNLQTGHEEA ALKGASFYNG DLRDEAFLRK  60
   61 VFQENDIEAV MHFAADSLVG ESVTDPLKYY DNNVYGAVCL LKVMKEFDVK QIVFSSTAAT 120
  121 YGEPDRVPIM ETDPTDPTNP YGETKLAIEK MLKWSEKAYG IRHVVLRYFN VAGAHVDGLI 180
  181 GEDHQPETHL IPIILQVALG KRDKIMIFGD DYPTPDGTCI RDYIHVMDLV DAHILAVERL 240
  241 RNGGESAVYN LGNGTGFSVK EVVETARKVT GCPIPAEVAE RRAGDPAQLI ASSEKAVKEL 300
  301 GWQPKYAELE TIIDSAWKWF KAHPNGYQS

Type	Start	End	Confidence
Signal Peptide	1	18	0.60
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	329	0.99