YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52787227, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKLLFLYG AWIVSLTATL GSLYFSEIRK FIPCELCWYQ RIMMYPLVLI LGIATFQGDA  60
   61 RVKKYVLPMA VIGAGISLMH YMEQKIPGFN GIKPCVTGVP CSGQYINWFG FITIPFLALI 120
  121 AFILIIIFMC FLKGKDE

Type	Start	End	Confidence
Cytoplasmic	1	5	0.85
Transmembrane Helix	6	26	0.91
Non-Cytoplasmic	27	36	0.81
Transmembrane Helix	37	56	0.89
Cytoplasmic	57	64	0.75
Transmembrane Helix	65	82	0.92
Non-Cytoplasmic	83	108	0.93
Transmembrane Helix	109	132	0.90
Cytoplasmic	133	137	0.92