YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FENR2_BACLD
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREDTKVYDI TIIGGGPVGL FTAFYGGMRQ ASVKIIESLP QLGGQLSALY PEKYIYDVAG  60
   61 FPKIRAQELV DNLKEQMAKF DQTVCLEQAV ESVEKQADGI FKLVTNKEIH YSKTVIITAG 120
  121 NGAFQPRKLE LESAAQFENA NLHYFIDDLN QFAGKRVAVL GGGDSAVDWA LMLEPIAKEV 180
  181 SIIHRRDKFR AHEHSVENLR NSKVNVLTPF VPTELIGSER IEQIVIEEVK GERKEIIDVD 240
  241 DVIVNFGFVS SLGPIKNWGL EIEKNSIVVK STMETNIEGF YAAGDICTYE GKVKLIASGF 300
  301 GEAPTAVNNA KAYMDPKARV QPLHSTSMFE NK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.70
Transmembrane Helix	7	28	0.69
Non-Cytoplasmic	29	332	0.96