YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52081657, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEILMSFIVG ILFMAATYLL LSKSLLRVII GTAVLSHGVH LLLLTMGGLK KGAPPILNEE  60
   61 STTYVDPLPQ ALILTAIVIA FGVTSFLLVM AFRAYQELKM DDMDQMRGND QHE

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.60
Transmembrane Helix	4	22	0.74
Cytoplasmic	23	27	0.54
Transmembrane Helix	28	49	0.74
Non-Cytoplasmic	50	70	0.89
Transmembrane Helix	71	92	0.93
Cytoplasmic	93	113	0.91